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Actual Growth

Actual growth varies from potential growth due to extreme temperatures, water deficiencies and nutrient deficiencies. This chapter reviews growth constraints as well as overrides that the user may implement to ignore growth constraints.

Growth Constraints

Plant growth may be reduced due to extreme temperatures, and insufficient water, nitrogen or phosphorus. The amount of stress for each of these four parameters is calculated on a daily basis using the equations summarized in the following sections.

Water Stress

Water stress is 0.0 under optimal water conditions and approaches 1.0 as the soil water conditions vary from the optimal. Water stress is simulated by comparing actual and potential plant transpiration:

wstrs=1βˆ’Et,actEt=1βˆ’wactualupEtwstrs=1-\frac{E_{t,act}}{E_t}=1-\frac{w_{actualup}}{E_t}wstrs=1βˆ’Et​Et,act​​=1βˆ’Et​wactualup​​ 5:3.1.1

where wstrswstrswstrs is the water stress for a given day, EtE_tEt​ is the maximum plant transpiration on a given day (mm H2_22​O), Et,actE_{t,act}Et,act​ is the actual amount of transpiration on a given day (mm H2_22​O) and wactualupw_{actualup}wactualup​ is the total plant water uptake for the day (mm H2_22​O). The calculation of maximum transpiration is reviewed in Chapter 2:2 and the determination of actual plant water uptake/transpiration is reviewed in Chapter 5:2.

Temperature Stress

Temperature stress is a function of the daily average air temperature and the optimal temperature for plant growth. Near the optimal temperature the plant will not experience temperature stress. However as the air temperature diverges from the optimal the plant will begin to experience stress. The equations used to determine temperature stress are:

tstrs=1tstrs=1tstrs=1 when Tβ€Ύav≀Tbase\overline T_{av} \le T_{base}Tav​≀Tbase​ 5:3.1.2

tstrs=1βˆ’exp[βˆ’0.1054βˆ—(Toptβˆ’Tβ€Ύav)2(Tβ€Ύavβˆ’Tbase)2]tstrs=1-exp[\frac{-0.1054*(T_{opt}-\overline T_{av})^2}{(\overline T_{av}-T_{base})^2}]tstrs=1βˆ’exp[(Tavβ€‹βˆ’Tbase​)2βˆ’0.1054βˆ—(Toptβ€‹βˆ’Tav​)2​] when Tbase<Tβ€Ύav≀ToptT_{base}<\overline T_{av} \le T_{opt}Tbase​<Tav​≀Topt​ 5:3.1.3

tstrs=1βˆ’exp[βˆ’0.1054βˆ—(Toptβˆ’Tβ€Ύav)2(2βˆ—Toptβˆ’Tβ€Ύavβˆ’Tbase)2]tstrs=1-exp[\frac{-0.1054*(T_{opt}-\overline T_{av})^2}{(2*T_{opt}-\overline T_{av}-T_{base})^2}]tstrs=1βˆ’exp[(2βˆ—Toptβ€‹βˆ’Tavβ€‹βˆ’Tbase​)2βˆ’0.1054βˆ—(Toptβ€‹βˆ’Tav​)2​] when Topt<Tβ€Ύav≀2βˆ—Toptβˆ’TbaseT_{opt}<\overline T_{av}\le 2*T_{opt}-T_{base}Topt​<Tav​≀2βˆ—Toptβ€‹βˆ’Tbase​ 5:3.1.4

tstrs=1tstrs=1tstrs=1 when 5:3.1.5

where is the temperature stress for a given day expressed as a fraction of optimal plant growth,is the mean air temperature for day (Β°C), is the plant’s base or minimum temperature for growth (Β°C), and is the plant’s optimal temperature for growth (Β°C). Figure 5:3-1 illustrates the impact of mean daily air temperature on plant growth for a plant with a base temperature of 0Β°C and an optimal temperature of 15Β°C.

Nitrogen Stress

Nitrogen stress is calculated only for non-legumes. SWAT+ never allows legumes to experience nitrogen stress.

Nitrogen stress is quantified by comparing actual and optimal plant nitrogen levels. Nitrogen stress varies non-linearly between 0.0 at optimal nitrogen content and 1.0 when the nitrogen content of the plant is 50% or less of the optimal value. Nitrogen stress is computed with the equation:

5:3.1.6

where is the nitrogen stress for a given day, and is a scaling factor for nitrogen stress. The scaling factor is calculated:

5:3.1.7

where bioN,optbio_{N,opt}bioN,opt​ is the optimal mass of nitrogen stored in plant material for the current growth stage (kg N/ha) and bioNbio_NbioN​ is the actual mass of nitrogen stored in plant material (kg N/ha).
nstrs=1βˆ’Ο•nΟ•n+exp[3.535βˆ’0.02597βˆ—Ο•n]nstrs=1-\frac{\phi _n}{\phi_n +exp[3.535-0.02597*\phi _n]}nstrs=1βˆ’Ο•n​+exp[3.535βˆ’0.02597βˆ—Ο•n​]Ο•n​​
nstrsnstrsnstrs
Ο•n\phi_nΟ•n​
Ο•n=200βˆ—(bioNbioN,optβˆ’0.5)\phi_n=200*(\frac{bio_N}{bio_{N,opt}}-0.5)Ο•n​=200βˆ—(bioN,opt​bioNβ€‹β€‹βˆ’0.5)

Harvest Index Override

In the plant and harvest only operations (.mgt), the model allows the user to specify a target harvest index. The target harvest index set in a plant operation is used when the yield is removed using a harvest/kill operation. The target harvest index set in a harvest only operation is used only when that particular harvest only operation is executed.

When a harvest index override is defined, the override value is used in place of the harvest index calculated by the model in the yield calculations. Adjustments for growth stage and water deficiency are not made.

HIact=HItrgHI_{act}=HI_{trg}HIact​=HItrg​ 5:3.3.3

where HIactHI_{act}HIact​ is the actual harvest index and HItrgHI_{trg}HItrg​ is the target harvest index.

Tβ€Ύav>2βˆ—Toptβˆ’Tbase\overline T_{av} > 2*T_{opt}-T_{base}Tav​>2βˆ—Toptβ€‹βˆ’Tbase​
tstrststrststrs
Tβ€Ύav\overline T_{av}Tav​
TbaseT_{base}Tbase​
ToptT_{opt}Topt​
Figure 5:3-1: Impact of mean air temperature on plant growth for a plant with TbaseT_{base}Tbase​= 0Β°C and ToptT_{opt}Topt​=15Β°C

Phosphorus Stress

As with nitrogen, phosphorus stress is quantified by comparing actual and optimal plant phosphorus levels. Phosphorus stress varies non-linearly between 0.0 at optimal phosphorus content and 1.0 when the phosphorus content of the plant is 50% or less of the optimal value. Phosphorus stress is computed with the equation:

pstrs=1βˆ’Ο•pΟ•p+exp[3.535βˆ’0.02597βˆ—Ο•p]pstrs=1-\frac{\phi_p}{\phi_p +exp[3.535-0.02597*\phi_p]}pstrs=1βˆ’Ο•p​+exp[3.535βˆ’0.02597βˆ—Ο•p​]Ο•p​​ 5:3.1.8

where pstrspstrspstrs is the phosphorus stress for a given day, and Ο•p\phi_pΟ•p​ is a scaling factor for phosphorus stress. The scaling factor is calculated:

Ο•p=200βˆ—(bioPbioP,optβˆ’0.5)\phi_p=200*(\frac{bio_P}{bio_{P,opt}}-0.5)Ο•p​=200βˆ—(bioP,opt​bioPβ€‹β€‹βˆ’0.5) 5:3.1.9

where bioP,optbio_{P,opt}bioP,opt​ is the optimal mass of phosphorus stored in plant material for the current growth stage (kg N/ha) and bioPbio_PbioP​ is the actual mass of phosphorus stored in plant material (kg N/ha).

Table 5:3-1: SWAT+ input variables that pertain to stress on plant growth.

Variable Name
Definition
Input File

Actual Yield

The harvest index predicted with equation 5:2.4.1 is affected by water deficit using the relationship:

HIact=(HIβˆ’HImin)βˆ—Ξ³wuΞ³wu+exp[6.13βˆ’0.883βˆ—Ξ³wu]+HIminHI_{act}=(HI-HI_{min})*\frac{\gamma _{wu}}{\gamma _{wu}+exp[6.13-0.883*\gamma _{wu}]}+HI_{min}HIact​=(HIβˆ’HImin​)βˆ—Ξ³wu​+exp[6.13βˆ’0.883βˆ—Ξ³wu​]Ξ³wu​​+HImin​ 5:3.3.1

where HIactHI_{act}HIact​ is the actual harvest index, HIHIHI is the potential harvest index on the day of harvest calculated with equation 5:2.4.1, HIminHI_{min}HImin​ is the harvest index for the plant in drought conditions and represents the minimum harvest index allowed for the plant, and Ξ³wu\gamma _{wu}Ξ³wu​ is the water deficiency factor. The water deficiency factor is calculated:

Ξ³wu=100βˆ—βˆ‘i=1mEaβˆ‘i=1mEo\gamma_{wu}=100*\frac{\sum^m_{i=1} E_a}{\sum ^m_{i=1} E_o}Ξ³wu​=100βˆ—βˆ‘i=1m​Eoβ€‹βˆ‘i=1m​Ea​​ 5:3.3.2

where EaE_aEa​ is the actual evapotranspiration on a given day, EoE_oEo​ is the potential evapotranspiration on a given day, is a day in the plant growing season, and is the day of harvest if the plant is harvested before it reaches maturity or the last day of the growing season if the plant is harvested after it reaches maturity.

Harvest Efficiency

In the harvest only operation (.mgt), the model allows the user to specify a harvest efficiency. The harvest efficiency defines the fraction of yield biomass removed by the harvesting equipment. The remainder of the yield biomass is converted to residue and added to the residue pool in the top 10 mm of soil. If the harvest efficiency is not set or a 0.00 is entered, the model assumes the user wants to ignore harvest efficiency and sets the fraction to 1.00 so that the entire yield is removed from the HRU.

yldact=yldβˆ—harveffyld_{act}=yld*harv_{eff}yldact​=yldβˆ—harveff​ 5:3.3.4

where yldactyld_{act}yldact​ is the actual yield (kg haβˆ’1^{-1}βˆ’1), yldyldyld is the crop yield calculated with equation 5:2.4.2 or 5:2.4.3 (kg haβˆ’1^{-1}βˆ’1), and harveffharv_{eff}harveff​ is the efficiency of the harvest operation (0.01-1.00). The remainder of the yield biomass is converted to residue:

Ξ”rsd=yldβˆ—(1βˆ’harveff)\Delta rsd=yld*(1-harv_{eff})Ξ”rsd=yldβˆ—(1βˆ’harveff​) 5:3.3.5

5:3.3.6

where is the biomass added to the residue pool on a given day (kg ha), is the crop yield calculated with equation 5:2.4.2 or 5:2.4.3 (kg ha) and is the efficiency of the harvest operation (0.01-1.00) is the material in the residue pool for the top 10 mm of soil on day (kg ha), and is the material in the residue pool for the top 10 mm of soil on day (kg ha).

Table 5:3-3: SWAT+ input variables that pertain to actual plant yield.

Variable Name
Definition
Input File

Actual Growth

The plant growth factor quantifies the fraction of potential growth achieved on a given day and is calculated:

Ξ³reg=1βˆ’max(wstrs,tstrs,nstrs,pstrs)\gamma_{reg}=1-max(wstrs,tstrs,nstrs,pstrs)Ξ³reg​=1βˆ’max(wstrs,tstrs,nstrs,pstrs) 5:3.2.3

where Ξ³reg\gamma_{reg}Ξ³reg​ is the plant growth factor (0.0-1.0), wstrswstrswstrs is the water stress for a given day, tstrststrststrs is the temperature stress for a given day expressed as a fraction of optimal plant growth, nstrsnstrsnstrs is the nitrogen stress for a given day, and pstrspstrspstrs is the phosphorus stress for a given day.

The potential biomass predicted with equation 5:2.1.2 is adjusted daily if one of the four plant stress factors is greater than 0.0 using the equation:

Ξ”bioact=Ξ”bioβˆ—Ξ³reg\Delta bio_{act}=\Delta bio*\gamma_{reg}Ξ”bioact​=Ξ”bioβˆ—Ξ³reg​ 5:3.2.1

where is the actual increase in total plant biomass on a given day (kg/ha), is the potential increase in total plant biomass on a given day (kg/ha), and is the plant growth factor (0.0-1.0).

The potential leaf area added on a given day is also adjusted daily for plant stress:

5:3.2.2

where is the actual leaf area added on day is the potential leaf area added on day that is calculated with equation 5:2.1.16 or 5:2.1.17, and is the plant growth factor (0.0-1.0).

T_BASE

TbaseT_{base}Tbase​: Base temperature for plant growth (Β°C)

crop.dat

T_OPT

ToptT_{opt}Topt​: Optimal temperature for plant growth (Β°C)

crop.dat

iii
mmm
Ξ”bioact\Delta bio_{act}Ξ”bioact​
Ξ”bio\Delta bioΞ”bio
Ξ³reg\gamma_{reg}Ξ³reg​
Ξ”LAIact,i=Ξ”LAIiβˆ—Ξ³reg\Delta LAI _{act,i}=\Delta LAI_i*\sqrt{\gamma _{reg}}Ξ”LAIact,i​=Ξ”LAIiβ€‹βˆ—Ξ³reg​​
Ξ”LAIact,i\Delta LAI _{act,i}Ξ”LAIact,i​
i,Ξ”LAIii, \Delta LAI_ii,Ξ”LAIi​
iii
Ξ³reg\gamma _{reg}Ξ³reg​

: Efficiency of the harvest operation

.mgt

rsdsurf,i=rsdsurf,iβˆ’1+Ξ”rsdrsd_{surf,i}=rsd_{surf,i-1}+\Delta rsdrsdsurf,i​=rsdsurf,iβˆ’1​+Ξ”rsd
Ξ”rsd\Delta rsdΞ”rsd
βˆ’1^{-1}βˆ’1
yldyldyld
βˆ’1^{-1}βˆ’1
harveffharv_{eff}harveff​
rsdsurf,irsd_{surf,i}rsdsurf,i​
iii
βˆ’1^{-1}βˆ’1
rsdsurf,iβˆ’1rsd_{surf,i-1}rsdsurf,iβˆ’1​
iβˆ’1i-1iβˆ’1
βˆ’1^{-1}βˆ’1

WSYF

HIminHI_{min}HImin​: Harvest index for the plant in drought conditions, the minimum harvest index allowed for the plant

crop.dat

HI_TARG

HItrgHI_{trg}HItrg​: Harvest index target

.mgt

HI_OVR

HItrgHI_{trg}HItrg​: Harvest index target

.mgt

HARVEFF

Biomass Override

The model allows the user to specify a total biomass that the plant will produce each year. When the biomass override is set in the plant operation (.mgt), the impact of variation in growing conditions from year to year is ignored, i.e. Ξ³reg\gamma_{reg}Ξ³reg​ is always set to 1.00 when biomass override is activated in an HRU.

When a value is defined for the biomass override, the change in biomass is calculated:

Ξ”bioact=Ξ”bioiβˆ—(biotrgβˆ’bioiβˆ’1)biotrg\Delta bio_{act} = \Delta bio_i*\frac{(bio_{trg}-bio_{i-1})}{bio_{trg}}Ξ”bioact​=Ξ”bioiβ€‹βˆ—biotrg​(biotrgβ€‹βˆ’bioiβˆ’1​)​ 5:3.2.4

where Ξ”bioact\Delta bio_{act}Ξ”bioact​ is the actual increase in total plant biomass on day iii (kg/ha), Ξ”bioi\Delta bio_iΞ”bioi​ is the potential increase in total plant biomass on day iii calculated with equation 5:2.1.2 (kg/ha), biotrgbio_{trg}biotrg​ is the target biomass specified by the user (kg/ha), and bioiβˆ’1bio_{i-1}bioiβˆ’1​ is the total plant biomass accumulated on day iβˆ’1i-1iβˆ’1 (kg/ha).

Table 5:3-2: SWAT+ input variables that pertain to actual plant growth.

Variable Name
Definition
Input File

BIO_TARG

biotrg/1000bio_{trg}/1000biotrg​/1000: Biomass target (metric tons/ha)

.mgt

harveffharv_{eff}harveff​